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Keep a big scan in focus with a focus map

Draft outline

Scaffold. Replace the bullet prompts with your own text and delete this banner when done.

Learning-oriented, for users. Over a large sample the focus drifts because the slide or plate is never perfectly flat. A focus map samples the focus at a few points and interpolates the correct Z everywhere in between — so a big scan stays sharp without running a full Z-stack at every tile.

The idea

  • Sample tilt/curvature across a large area; interpolate a focus surface.
TODO

This Focus Mapping video was previously on the Day-n guides page; it lives here now as the tutorial. Decide whether to keep the video, replace with screenshots, or both.

Step 1 — Place focus points

  • How to add focus reference points across the region and focus each one.

TODO image

Focus-map point placement UI. Notion source: FRAME_DOKU_FROM_NOTION/FAT FRAME #0007 Korea - Part 8 (1) ("Testing large area scan 20x Fokus Map").

Step 2 — Run the mapped scan

  • Start the scan using the interpolated focus; how it differs from single-Z.

When to use focus map vs. autofocus vs. Z-stack

  • Comparison table prompt: speed, robustness, data size, sample type.